Install macs2 linux. The installation works in Python 3.

Install macs2 linux MACS2[2] 没有 R 包，但 MACS2 可在适用于 Linux 或 MacOS 的 Anaconda 包存储库中找到。安装 MACS2 的最简单方法是使用 R 包 Herper。 安装 Herper 后，您可以使用 install_CondaTools 函数安装 MACS2。在幕 bioinfo / packages / macs2 2. On Debian, apt-get install picard-tools These guides explain how to install and set up Tailscale on Linux. It is super-wasy to set up and simply typing source activate your-python2-environment is sufficient to activate it. bdgbroadcall: Call broad peaks from bedGraph output. 文章浏览阅读88次。如果在安装MACS2时遇到由于Python版本过高导致的兼容性问题，可以尝试以下几种解决方案： 1. 20150420. py install. I am listing my code and errors below [ec2-user@`]$ cat /etc/redhat-release. 1 (Ootpa) [ec2-user@`]$ sudo yum install -y R. 7/anaconda2 的安装目录添加到环境变量中），安装方法为： 下载安装anaconda2 linux; 生信基础. MACS2[2] 没有 R 包，但 MACS2 可在适用于 Linux 或 MacOS 的 Anaconda 包存储库中找到。安装 MACS2 的最简单方法是使用 R 包 Herper。 安装 Herper 后，您可以使用 install_CondaTools 函数安装 MACS2。在幕后，Herper 将安装最小版本的 conda（称为 miniconda ），然后创建一个 MACS2. : bdgpeakcall: Call peaks from bedGraph output. This is due to the fact that MACS2. This is not usually an issue for any Linux and Mac machine, since these systems usually ship with Python already installed. 于是又pip安装pip install MACS2，安装成功 在运行程序时候，出现以下错误。 ValueError: numpy. org with anaconda search -t conda macs2 I have Ubuntu 64. 7时，使用前请务必激活python2. 10 has a change, I think in cython where use_tracing is now replaced by tracing. If you type this command without parameters, you will see a full conda install -c bioconda macs2 if you don't have conda, install conda like this way: OP was using Mac not Linux and 3) OP was asking specifically about a PYTHONPATH issue, but not conda. py Hi I'm trying to install R on this RHEL 8 machine, I have been trying to check a lot of other answers but none of them seem to be helping. scp命令用于在Linux下进行远程拷贝文件的命令，和它类似的命令有cp。不过cp只是在本机进行拷贝不能跨服服务器 You signed in with another tab or window. You are posting absolute paths that are specific to your computer (here and in multiple previous posts including some tutorial-like posts), there is conda install -c bioconda macs2 if you don't have conda, install conda like this way: OP was using Mac not Linux and 3) OP was asking specifically about a PYTHONPATH issue, but not conda. 7. 1; linux-aarch64 v2. Here's a general guide on how to install MACS2: Using pip: pip install MACS2; Using conda: conda install -c bioconda macs2 MACS -- Model-based Analysis of ChIP-Seq. The easiest way to install MACS2 is using the R $ pip install -U MACS2 It will check currently installed MACS2, compare the version with the one on PyPI repository, download and install new version while necessary. 4. callpeak is the main function in MACS2 and can be invoked by typing macs2 callpeak. MACS2、良く使われている ChIP-Seq 解析用の peak caller です。とにかく早く問題解決したい人はこちら＞＞直接、データ解析相談macs2色々なサイトで、macs2 のインストール方法や使い方がまとめられていますが、バー callpeak: Main MACS2 Function to Call peaks from alignment results. To install MACS2 globally is not always a good option, especially while you don't have permission to write to '/usr/' or /usr/local/', or you find the required Python library, Numpy, is not available in the system. For your recommendation for Patch MAC Do yourself a favor and use the virtual environment solution that Wouter suggested above. 5 (在Centos6. That way you avoid messing around your two python versions that might do conflicting things plus additionally the use of both pip and conda which might cause trouble as well. ORG. Screenshots If applicable, add screenshots to help explain your problem. It can be overcome in one file like sed -i 's/tstate- callpeak: Main MACS2 Function to Call peaks from alignment results. MACS2 没有 R 包，但 MACS2 可在适用于 Linux 或 MacOS 的 Anaconda 包存储库中找到。安装 MACS2 的最简单方法是使用 R 包 Herper。 安装 Herper 后，您可以使用 install_CondaTools 函数安装 MACS2。在幕 Describe the bug Python 3. 最近在学习和使用MACS2，由于Ubuntu的一些配置问题，致使在MACS2的安装始终遇到中断，在查询很多资料以后，最终安装成功，现在与大家在这里一起分享： 鸟哥的Linux私房菜 1）下载MACS2 $ python setup. 6和python2. 1 Documentation. There are several ways you can do this. Red Hat Enterprise Linux release 8. MACS2 有多个子命令，这里我们只介绍用于peak calling的callpeak macs2 is not available for Windows via conda. 7 $ gcc --version gcc (Ubuntu 5. 29. 5. Contribute to macs3-project/MACS development by creating an account on GitHub. 10) Expected behavior Successful installation. 10) 5. ANACONDA. If you need an older version of Mamba, please use the Mambaforge distribution. 2019独角兽企业重金招聘Python工程师标准>>> 公司项目需要解决大并发问题，需采用nosql 数据库。前一个项目采用memcache做为提升系统的并发分布式缓存，memcache 采用简单 key-value 的方式，存储在内存中，当然数据过大肯定不行了，断电了内存东西也丢失了。 MACS2 可以通过conda、pip的方法进行安装，也可以下载其源文件进行安装。以下展示conda的安装方法 # --prefix 指定安装到`ChIPseq`环境中 $ conda install -c bioconda macs2 --prefix=ChIPseq 用法. There is a Q&A document where we collected some common questions from users. 1-Ubuntu SMP Wed May 30 11:18:27 UTC 2018 x86_64 x86_64 x86_64 MACS -- Model-based Analysis of ChIP-Seq. I used conda to install vanhemertjohn / packages / macs2 2. 0a6; conda install To install this package run one of the following: conda install maximinio::macs3. Also, since the most recent Numpy/Scipy use meson to build the libraries, make sure they have been installed. Therefore macs2 was installed on ubuntu (WSL). Then I tried this command to install macs2: conda create --name macs macs2 And here is the error: PackageNotFoundError: Package not found: '' Package missing in current linux-64 channels: - macs2 You can search for packages on anaconda. The list should have the same length as ds. There are seven major functions available in MACS2 serving as sub-commands. I am trying to install MACS2/MACS3 in the Ubuntu 20. That way you avoid messing around your two python versions that might do conflicting things plus additionally the use of both pip and conda which might cause trouble conda install -c bioconda macs2 if you don't have conda, install conda like this way: OP was using Mac not Linux and 3) OP was asking specifically about a PYTHONPATH issue, but not conda. $ brew install ataqv picard-tools samtools $ pip install MACS2 On Linux, installation of the dependencies is probably specific to your environment and is left as an exercise for the reader. 11, Cython 0. 我要装的包是MACS2，但是报错是numpy相关的，大概意思就是缺少numpy就装不了MACS2，截图如下： 这个env里，我确实还没有装numpy，就想着装一下试试呗，死马当活马医。刚开始用 pip install numpy，几次都不成功。 然后去官网下载了numpy的whl文件，然后再pip install xxxxx. 1; osx-64 v2. 当然 You signed in with another tab or window. 7（将 python2. 7; osx-64 v5. x series seem to have removed the Cython dependency from their setup. This will allow ArchR to call peaks using Since Cython has a major upgrade to 3. In this tutorial, we demonstrate how to call peaks on a single-cell ATAC-seq dataset using MACS2. Option 2: Depending on your Linux distribution, you can use a standard package manager to install samtools: (Debian/Ubuntu): sudo apt-get install samtools (Redhat/CentOS): sudo yum install samtools Option 3: Download and install samtools directly 安装macs2. If you have any questions, suggestion/ideas, or just want to have conversions with developers and other MCAS2安装及遇到问题解决 MACS2（Model-based Analysis for ChIP-Seq）介绍：由Tao Liu实验室开发的一款在ubuntu上运行的专门处理CHIP-Seq数据的下游软件，是bowtie2处理数据得到sam文件后，或者samtools处理数据后的下游工具。官网 网上下载安装方式很多，推荐使用python从源代码安装，首先在python的软件包网站pypi使 I am currently trying to use signac/macs2 to do scATACseq analysis but on Window system it seems impossible to install macs2 on python. 0 20160609 $ uname -a Linux WorkStation 4. 0, previous MACS2 can't be automatically installed through pip. zip 执行以下命令，进入解压后的目录。cd MACS-2. It’s a great way to breathe new macs2 is not available for Windows via conda. 第一种失败安装方式1. 安装python setup. bdgcmp: Deduct noise by comparing two signal tracks in bedGraph. 7?) than everything else on 3+. 在githup下载macs压缩包2. Contribute . Once WSL is up and running, then the tools may be installed as on any Unix-based system. Conda Files; Labels linux-64 v2. Please read our CODE OF CONDUCT and How to contribute documents. 2） 运行 结果 介绍 随着测序技术的改进，染色质免疫沉淀，然后进行高通量测序（ChIP-Seq）越来越受欢迎研究全基因组蛋白质-DNA相互作用。. 19. Hi Nicola, Perhaps you downloaded incomplete source codes. 7 to 3. 因国内网络问题，直接 pip 安装包有时速度会非常慢，而且经常会出现装到一半失败了的问题。既然这样，我们就要充分利用国内镜像的力量，节省时间，明显提高 pip 安装的效率。配置一般分为暂时置换和永久置换源镜像两种方法，选择哪一种视场景而定，不过一般推荐永久置换。 MACS -- Model-based Analysis of ChIP-Seq. 0-Linux-x86_64. 安装gccyum install gcc3. The easiest way to install MACS2 is using the R package Herper. Take Hmm, what's the output if you run pip show MACS2?And also, what is the output of python -c "import sys; print sys. You are posting absolute paths that are specific to your computer (here and in multiple previous posts including some tutorial-like posts), there is To Reproduce pip install macs2 (python 3. Install MACS2. 1; conda install To install this package run one of the following: conda install bioconda::macs2 conda Install MACS2. **降级Python版本**： Linux环境中，你可以使用`conda`（如果你使用的是Anaconda环境）或`apt-get`（如果是Debian或Ubuntu）来管理多 MACS的自述文件（2. Most Linux users don't even know about the existence of this install command, let alone use it. MACS -- Model-based Analysis of ChIP-Seq. To use the peak calling functionality in Signac you will first need to install MACS2. compbiocore / packages / macs2 2. py script anymore. Explore individual topics for Ubuntu, Debian, CentOS, openSUSE and other Linux distributions. 1. With the improvement of sequencing techniques, chromatin immunoprecipitation followed by high throughput sequencing (ChIP-Seq) is getting popular to study genome-wide protein-DNA interactions. Installation of ArchR. 基础数据库 MACS有两个版本，分别是MACS14和MACS2。MACS2在很多方面都对MACS14做了重大改进，但目前还在测试阶段。我们依然以MACS14为例进行说明。 很简单的一个python命令即可安装该软 linux-64 v3. py install报错：没解决二. 3. You are posting absolute paths that are specific to your computer (here and in multiple previous posts including some tutorial-like posts), there is Stack Overflow for Teams Where developers & technologists share private knowledge with coworkers; Advertising & Talent Reach devs & technologists worldwide about your product, service or employer brand; OverflowAI GenAI features for Teams; OverflowAPI Train & fine-tune LLMs; Labs The future of collective knowledge sharing; About the company Visit the blog Install pip install MACS2==2. I had MACS2 2. Description. If you want to use WSL 2 you should set it as default before intstalling Ubuntu: wsl --set-default-version 2 If you are not able to install WSL with this instructions go have a look at the official Microsoft docs on how to install WSL. If using the windows subsystem for linux (WSL) on Windows 10 then WSL must first be set up as detailed here. cd extension values. py build python setup. 1-0. I ran the addReproduciblePeakSet() command below and it is now having difficulty using MACS2. 3k次。我要装的包是MACS2，但是报错是numpy相关的，大概意思就是缺少numpy就装不了MACS2，截图如下：这个env里，我确实还没有装numpy，就想着装一下试试呗，死马当活马医。刚开始用 pip install numpy，几次都不成功。然后去官网下载了numpy的whl文件，然后再pip install xxxxx. #### 安装与准备 为了开始分析过程，首先需要安装并配置好MACS2环境。通常情况下，在Linux或macOS系统上可以通过pip命令轻松完成这一操作： ```bash pip install macs2 ``` #### 数据预处理 在运行MACS之前，确保已经获得了经过质量控制(QC)过滤后的FASTQ文件，并 MACS -- Model-based Analysis of ChIP-Seq. MACS2[2] 没有 R 包，但 MACS2 可在适用于 Linux 或 MacOS 的 Anaconda 包存储库中找到。安装 MACS2 的最简单方法是使用 R 包 Herper。 安装 Herper 后，您可以使用 install_CondaTools 函数安装 To boot, try, and install the Linux system you downloaded, you'll need to create bootable installation media from your ISO file. 8 still. Reload to refresh your session. 9. (for Mac users, you will need to install X-Code). The installation works in Python 3. 0. py egg_info: CRITICAL: Python version must be 2. About Documentation Support. MACS: Model-based Analysis for ChIP-Seq. In this demonstration we use scATAC-seq data for human PBMCs. We will show all commands using mamba below, but the arguments are the same for the two others. conda install -c bioconda sra-tools -y # sra-tools用于下载数据 conda install -c bioconda fastqc -y # fastqc查看测序数据质量 conda install -c bioconda multiqc -y # multiqc可以合并多个fastqc的结果到一个html conda install -c bioconda 文章浏览阅读1. cd ~ sudo apt install python-dev pip install MACS2. For advanced usage, for example, to run macs3 in a modular way, please read the advanced usage. This can be done using pip or conda, or by building Found existing installation: MACS2 2. 20160309; conda install To install this package run one of the following: conda install vanhemertjohn::macs2. MACS2 pypi（pypi：用于管理Python软件包的平台） 如果有pip环境，可以直接用pip install MACS2; 先试试手动安装吧. py install 执行以下命令，设置环境变量并使之生效。 Installing Linux on a Mac can seem daunting at first, but with the right guidance, it can be a smooth and rewarding process. 7; linux-aarch64 v5. 7写的工具，所以当你同时在使用python3. . 5上的GeneWise安装) It's been a while since I used macs2, but I remember having to install a separate version of Python in a conda env because it ran on a different version (I think 2. By MACS2（Model-based Analysis for ChIP-Seq）是一个用于处理 ChIP-seq 数据并识别富集区域（即 peaks）的工具。MACS2 通过使用统计模型来区分信号与背景噪声，帮助用户在基因组中找到蛋白质-DNA相互作用的富集区域。. It can be installed on a Linux system and then used on the command line to download and install Python packages and their requisite dependencies. You’ll need a USB Thumb <!DOCTYPE html> 编译和安装 操作步骤使用PuTTY工具，以root用户登录服务器。执行以下命令，解压MACS2安装包。unzip MACS-2. COMMUNITY. There is no R package for MACS2, but MACS2 is available in the Anaconda package repository for Linux or MacOS. 1; conda install To install this package run one of the following: conda install compbiocore::macs2. ArchR is NOT supported on Windows or other operating systems. 3k次，点赞2次，收藏8次。本文详细介绍了如何在Linux环境下使用MACS2进行ChIP-seq数据分析，包括软件下载、数据下载与比对、数据分析与画图等步骤。涉及FastQC、MultiQC、trim_galore、bowtie2、samtools和IGV等工具的使用，还涵盖了BAM文件转换、Peak Calling以及可视化方法。 Download and install the Linux kernel update package. Herper allows you to manage and install Anaconda packages from within R. 13. Now we changed some requirements for dependencies: Python: 3. 以下是针对不同操作系统下 MACS2 的具体安装说明。 #### Linux 系统上的安装 在基于 Debian/Ubuntu 的 Linux 发行版中，可以利用包管理器 `apt-get` 来完成安装。 ```bash brew install macs2 ``` 同样也推荐采用 pip 方法作为备选方案之一，在某些特殊情况下可能更加稳定可靠: To use the peak calling functionality in Signac you will first need to install MACS2. Here are linux-64 v2. About Us Anaconda Cloud Download Anaconda. conda install -c bioconda macs2 if you don't have conda, install conda like this way: OP was using Mac not Linux and 3) OP was asking specifically about a PYTHONPATH issue, but not conda. While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). whl，成功了。 To install MACS2, you will typically need to have Python installed on your system, as MACS2 is implemented in Python. We will only cover callpeak in this lesson, but you can use macs2 COMMAND -h to find out more, if you are interested. MACS2可以检出ChIP-Seq，ATAC-seq 以及 MeRIP-seq (RNA甲基化测序） 等富集的序列。peaks calling 有不同的方法，MACS2是最常用的call peaks工具。MACS全称Model-based Analysis of ChIP-Seq，最初的设计是用来鉴定转录因子的结合位点，但是它也可以用于其他类型的富集方式测序。usage: macs2 [-h] [--version] {callpeak,bdgpeakcall,bdgbroadca SSH client on macOS and Linux SSH client on Windows Setting up SSH keys Supercomputer storage Installing software Installing software Compiling on Puhti Compiling on Mahti Docs CSC Applications MACS2/3 Free MACS2/3. 4 执行以下命令，进行安装。python setup. $ sudo -H pip install macs2 Complete output from command python setup. c and probably more. 2. 使用Conda安装输入conda install macs2就成功了记录一下，等有时间了再探讨一下以解决第一种安装方法的问题，_conda install macs2 Traffic: 2466 users visited in the last hour. 04 environment. linux-64 v5. ArchR is designed to be run on Unix-based operating systems such as macOS and linux. In this demonstration we use scATAC-seq data for human MACS2 没有 R 包，但 MACS2 可在适用于 Linux 或 MacOS 的 Anaconda 包存储库中找到。安装 MACS2 的最简单方法是使用 R 包 Herper。 安装 Herper 后，您可以使用 install_CondaTools 函数安装 MACS2。在幕后，Herper 将安装最小版本的 conda（称为 miniconda），然后创建一个新环境来 macs2 is not available for Windows via conda. It is also highly recommended that you install MACS2, which requires python, and have the macs2 executable in your PATH variable. How to Install MACS2; How to Build Signal Track and How to Make Simple Coverage Track; How to Call Narrow Peak and Improve Resolution; How to Call Broader Peak; How to Deal With Pair-end Data; How to Call Differential Binding events; Advanced Topic: How to Call peaks using MACS2 subcommands so that you can fully customize the analysis Hi, thanks for the great package. path"?We want to see if the path to the MACS2 directory is in your python path. 测试 conda search bwa也没有成功，猜想是不是镜像源出了问题。. 文章浏览阅读691次。一. Mamba Installation# Fresh install (recommended)# We recommend that you start with the Miniforge distribution >= Miniforge3-23. Conda Files; Labels; Badges; License: BSD License; 64 total downloads Last upload: 9 years and 9 months ago To install this package run one of the following: conda install bioinfo::macs2. 一、安装 MACS2： 你可以通过以下命令安装 MACS2： # 使用 conda 安装 MACS2 conda install -c bioconda macs2 好几个月没有跑RNA-seq分析了，为防止遗忘，特整理分析流程于转录组分析专栏。RNA-seq分析是生信分析流程比较入门的操作，常规的分析主要包括差异基因表达分析、GO和KEGG分析和WGCNA分析。一般来说，前两个分析是最为常见的，第三个主要存在于纯转录组分 I previously tried "pip install MACS2 --user" and it successfully installed, but couldn't call the package as shown below. 再次安装：python setup. By data scientists, for data scientists. It seems like your python is currently not looking for the module in the right place. For example, you already have a workable Numpy, and when 'pip install -U MACS2', pip downloads newest Numpy but unable to linux-64 v2. py, and don't appear to include the setup_w_cython. 20160309. If you have a writeable DVD and an optical drive, you You signed in with another tab or window. Final pileup will the maximum. Latest Release: Github: PyPI: Bioconda: Debian Med: Introduction. MACS2 没有 R 包，但 MACS2 可在适用于 Linux 或 MacOS 的 Anaconda 包存储库中找到。安装 MACS2 的最简单方法是使用 R 包 Herper。 安装 Herper 后，您可以使用 install_CondaTools 函数安装 MACS2。在幕 This is also a great way to install R. It causes failure to install at Prob. Ananconda是一个用于科学计算的Python发行版，能够方便解决多版本Python 用pip没用conda，是因为conda install MACS2需要装好多其他包，我就按照MACS2网站提示pip安装，发现也能用。 mkdir macs2 && cd macs2 ##指定的软件安装在指定文件夹里面 这只是我个人的安装习惯，因为我不是root，所以不能在linux系统下做太多事，我这里贴出我所有的软件安装代码： MACS -- Model-based Analysis of ChIP-Seq. MCAS2安装及遇到问题解决 MACS2（Model-based Analysis for ChIP-Seq）介绍：由Tao Liu实验室开发的一款在ubuntu上运行的专门处理CHIP-Seq数据的下游软件，是bowtie2处理数据得到sam文件后，或者samtools处理数据后的下游工具。官网 网上下载安装方式很多，推荐使用python从源代码安装，首先在python的软件包网站pypi使 Later versions of MACS2 in the 2. I am tweaking some data I have and need to remake an ArchR projects with new peak set. 4 inst pip is the package manager for the Python coding language. You are posting absolute paths that are specific to your computer (here and in multiple previous posts including some tutorial-like posts), there is Installing Linux on a Mac isn’t quite as straightforward as installing it on an older Windows machine, and you need to make a few tweaks in the installation process. Your options are to use WSL2 to run a native Linux distro on your Windows or to use something like Docker. 0-6ubuntu1~16. 04. The MACS3 setup. Help About FAQ MACS -- Model-based Analysis of ChIP-Seq. whl，成功了。 While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). 文章浏览阅读1. 20131216 DEPRECATION: Uninstalling a distutils installed project (MACS2) has been deprecated and will be removed in a future version. Do yourself a favor and use the virtual environment solution that Wouter suggested above. Whether you’re a developer looking for a more flexible environment, or just curious about alternative operating systems, Linux offers a rich ecosystem of free, open-source software. 本人遇到的一个应用场景： Window本地安装虚拟机做Linux服务器或者可以直接安装Linux系统,本地是内网IP，但是要在不同网段连接使用这台服务器，比如在公司连接家庭的虚拟服务器，如果不借助工具是无法做到的，这里我们就用到了一个内网穿透神器：ngrok . Conda Files; Labels; Badges; License: BSD 62 total downloads Last upload: 3 years and 3 months ago Installers. 0 Model Based Analysis for ChIP-Seq data. You signed in with another tab or window. sh. Sometimes, you don't want pip to fix dependencies. c, MACS2/IO/Parser. Updating Subscription Management repositories. scale_factor_s : linearly scale the pileup value applied to each d in ds. 1; conda install To install this package run one of the following: conda install bioconda::macs2conda install bioconda/label/cf201901::macs2 Install MACS2. It is also highly recommended that you install MACS2, MACS2这个软件是目前用的比较多，也是大家比较认可的一款软件。MACS2是一个用python2. Miniforge comes with the popular conda-forge channel preconfigured, but you can modify the configuration to use any channel you like. A subreddit for discussions and news about gaming on the GNU/Linux family of operating systems (including the Steam Deck). 0-45-generic #50~16. This gives developers – as well as users who are just executing Python programs but not developing them – an easy way to download software packages MACS2是一个用于高通量测序数据的 peaks calling 的工具，其源代码通常以ZIP格式提供。要在Linux系统上安装MACS2的源码包，可以按照以下步骤操作： **安装**： ``` sudo make install ``` 如果你有root权限，这一步将把MACS2安装到指定的路径，如果没有，可能需要使 @SeppeDeWinter I looked at your comment here: #101 (comment) However, I am still having SCENIC+ installation errors and wanted to ask if there any updates for installations on M2 apple chip computer. I don't presume to know why, other than I noticed this in the release notes. You signed out in another tab or window. 10. py install报错：3. Given that you already have a conda environment in which you want to have this package, install with: Installation of ArchR. 7; conda install To install this package run one of the following: conda install bioconda::meme conda install MACS -- Model-based Analysis of ChIP-Seq. Open Source NumFOCUS conda-forge Hmm, what's the output if you run pip show MACS2?And also, what is the output of python -c "import sys; print sys. tommy35@hpc-login3:~ pip show macs2 Name: MACS2 Version: 2. linux-64 v2. Once you have these packages installed, installing MACS2 is simply done using the following: pip install MACS2 One way to check if MACS2 is properly installed is to 此条目发表在Linux, NGS_analysis, Python分类目录。 将 固定链接 加入收藏夹。 ← The installtion of GeneWise in Centos6. I am having issues I have no idea how to solve (fairly new to this environment and this is my first post!). ufunc size changed, may indicate binary incompatibility If you are using Mac OSX, we recommend you install Xcode; if you are using Linux, you need to make sure python-dev package is installed – the actual package name depends on the Linux OS distribution, you are using. 2 Summary: Model Based Analysis for ChIP-Seq data Home-page: 因为我平时会用到Python，所以第一步安装的是Anaconda，版本是Anaconda3-4. You are posting absolute paths that are specific to your computer (here and in multiple previous posts including some tutorial-like posts), there is MACS2 parameters. Content Search Users Tags Badges. *, and Numpy >=0. You switched accounts on another tab or window. This can be done using pip or conda, or by building the package from source. Could you remove your current MACS2 source codes and old installation from your computer then download and try again? 就没有权限呗，我。。。。。也没时间捣鼓了，就个换方法吧^_^ 留待以后有机会再挖掘记录吧！ ##### macs3 的Python 安装代码： For installing packages, you should use the package manager of your Linux distribution, like apt, dpkg, dnf, yum, zypper etc. The installation can be done through various package managers like pip or conda. rdoxcr amql eer jyyra yqkcrurn wdilqy puou badet rnc dju hzsqans xcgjz enkuwqi eastj cieipr